Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.17■□□□□ 0.34
SSR1P43307 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SSR1P43307 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
SSR1P43307 ZNF259P1-201ENST00000407656 1365 ntBASIC17.16■□□□□ 0.34
SSR1P43307 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.16■□□□□ 0.34
SSR1P43307 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.16■□□□□ 0.34
SSR1P43307 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.16■□□□□ 0.34
SSR1P43307 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.16■□□□□ 0.34
SSR1P43307 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.16■□□□□ 0.34
SSR1P43307 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.16■□□□□ 0.34
SSR1P43307 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SSR1P43307 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.16■□□□□ 0.34
SSR1P43307 LINC02447-202ENST00000501888 2146 ntBASIC17.16■□□□□ 0.34
SSR1P43307 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.16■□□□□ 0.34
SSR1P43307 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.16■□□□□ 0.34
SSR1P43307 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.16■□□□□ 0.34
SSR1P43307 AC120114.3-201ENST00000611923 658 ntBASIC17.16■□□□□ 0.34
SSR1P43307 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SSR1P43307 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SSR1P43307 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSR1P43307 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SSR1P43307 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.15■□□□□ 0.34
SSR1P43307 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.15■□□□□ 0.34
SSR1P43307 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SSR1P43307 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.15■□□□□ 0.34
SSR1P43307 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.15■□□□□ 0.34
SSR1P43307 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.15■□□□□ 0.34
SSR1P43307 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.15■□□□□ 0.34
SSR1P43307 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.15■□□□□ 0.34
SSR1P43307 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.15■□□□□ 0.34
SSR1P43307 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSR1P43307 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 CDC14C-201ENST00000428251 1719 ntBASIC17.15■□□□□ 0.34
SSR1P43307 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
SSR1P43307 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
SSR1P43307 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.14■□□□□ 0.34
SSR1P43307 AC092919.2-201ENST00000623631 1645 ntBASIC17.14■□□□□ 0.33
SSR1P43307 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 AC105917.1-201ENST00000506637 2539 ntBASIC17.14■□□□□ 0.33
SSR1P43307 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 AC092474.2-201ENST00000424288 719 ntBASIC17.14■□□□□ 0.33
SSR1P43307 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.14■□□□□ 0.33
SSR1P43307 AC140658.5-201ENST00000438532 169 ntBASIC17.14■□□□□ 0.33
SSR1P43307 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.14■□□□□ 0.33
SSR1P43307 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.14■□□□□ 0.33
SSR1P43307 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.14■□□□□ 0.33
SSR1P43307 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms