Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 AC092364.2-201ENST00000596710 2692 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 FAM58DP-201ENST00000428076 619 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 AL139010.1-201ENST00000454878 894 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 HLA-J-203ENST00000494367 1087 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 AL512356.2-201ENST00000546955 174 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 AC026150.2-201ENST00000564693 1156 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.14□□□□□ -0.31
CEACAM3P40198 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 AC003101.2-201ENST00000612557 442 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 MIR6080-201ENST00000617359 66 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 TCAF2P1-201ENST00000291129 2421 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 PCDHA1-201ENST00000378133 2726 ntBASIC13.14□□□□□ -0.31
CEACAM3P40198 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.14□□□□□ -0.31
CEACAM3P40198 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CEACAM3P40198 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CEACAM3P40198 PCDHA3-202ENST00000532566 4594 ntBASIC13.13□□□□□ -0.31
CEACAM3P40198 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
CEACAM3P40198 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM3P40198 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CEACAM3P40198 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 AP001282.1-201ENST00000531301 1499 ntBASIC13.13□□□□□ -0.31
CEACAM3P40198 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CEACAM3P40198 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM3P40198 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.13□□□□□ -0.31
CEACAM3P40198 AC067863.1-201ENST00000494933 530 ntBASIC13.13□□□□□ -0.31
CEACAM3P40198 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM3P40198 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 AC027612.4-201ENST00000605371 583 ntBASIC13.13□□□□□ -0.31
CEACAM3P40198 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 PCDHB19P-201ENST00000570871 2371 ntBASIC13.13□□□□□ -0.31
CEACAM3P40198 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM3P40198 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CEACAM3P40198 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM3P40198 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM3P40198 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.12□□□□□ -0.31
CEACAM3P40198 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM3P40198 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms