Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.55■□□□□ 0.72
PDE6BP35913 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.55■□□□□ 0.72
PDE6BP35913 FAM197Y7-201ENST00000432892 766 ntBASIC19.55■□□□□ 0.72
PDE6BP35913 AL591846.1-201ENST00000451736 433 ntBASIC19.55■□□□□ 0.72
PDE6BP35913 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 AP001582.1-201ENST00000525856 295 ntBASIC19.55■□□□□ 0.72
PDE6BP35913 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.55■□□□□ 0.72
PDE6BP35913 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.55■□□□□ 0.72
PDE6BP35913 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.55■□□□□ 0.72
PDE6BP35913 AC005915.1-201ENST00000624912 2018 ntBASIC19.55■□□□□ 0.72
PDE6BP35913 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.55■□□□□ 0.72
PDE6BP35913 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.55■□□□□ 0.72
PDE6BP35913 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.55■□□□□ 0.72
PDE6BP35913 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 AC105020.1-201ENST00000435356 2205 ntBASIC19.55■□□□□ 0.72
PDE6BP35913 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PDE6BP35913 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.54■□□□□ 0.72
PDE6BP35913 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 AHCYP2-201ENST00000430630 1300 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PDE6BP35913 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.54■□□□□ 0.72
PDE6BP35913 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.54■□□□□ 0.72
PDE6BP35913 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
PDE6BP35913 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PDE6BP35913 AC007969.1-201ENST00000433675 447 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.54■□□□□ 0.72
PDE6BP35913 AKR7A2P1-201ENST00000460134 915 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 AC078819.1-201ENST00000547454 765 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 AC012085.1-201ENST00000548270 765 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.54■□□□□ 0.72
PDE6BP35913 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.54■□□□□ 0.72
PDE6BP35913 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.54■□□□□ 0.72
PDE6BP35913 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.54■□□□□ 0.72
PDE6BP35913 AC107373.2-201ENST00000607735 490 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 AL021578.1-201ENST00000613646 709 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 AP005019.2-201ENST00000615104 511 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 AC138951.2-201ENST00000623455 1161 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 AC132938.4-201ENST00000623835 848 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PDE6BP35913 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.54■□□□□ 0.72
PDE6BP35913 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PDE6BP35913 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6BP35913 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
PDE6BP35913 AC018470.1-201ENST00000624790 3129 ntBASIC19.54■□□□□ 0.72
PDE6BP35913 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.53■□□□□ 0.72
PDE6BP35913 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.53■□□□□ 0.72
PDE6BP35913 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.53■□□□□ 0.72
PDE6BP35913 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDE6BP35913 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.53■□□□□ 0.72
PDE6BP35913 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PDE6BP35913 AC020916.1-201ENST00000587762 1774 ntBASIC19.53■□□□□ 0.72
PDE6BP35913 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PDE6BP35913 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.53■□□□□ 0.72
PDE6BP35913 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PDE6BP35913 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.53■□□□□ 0.72
PDE6BP35913 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.53■□□□□ 0.72
PDE6BP35913 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6BP35913 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.53■□□□□ 0.72
PDE6BP35913 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms