Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFC4P35249 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.94■□□□□ 0.78
RFC4P35249 AC134407.2-201ENST00000625089 1978 ntBASIC19.94■□□□□ 0.78
RFC4P35249 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RFC4P35249 AP001282.1-201ENST00000531301 1499 ntBASIC19.93■□□□□ 0.78
RFC4P35249 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC4P35249 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC4P35249 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC4P35249 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFC4P35249 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.93■□□□□ 0.78
RFC4P35249 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.93■□□□□ 0.78
RFC4P35249 AC078819.1-201ENST00000547454 765 ntBASIC19.93■□□□□ 0.78
RFC4P35249 AC012085.1-201ENST00000548270 765 ntBASIC19.93■□□□□ 0.78
RFC4P35249 MIR4741-201ENST00000579822 90 ntBASIC19.93■□□□□ 0.78
RFC4P35249 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.93■□□□□ 0.78
RFC4P35249 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RFC4P35249 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFC4P35249 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 AC138951.2-201ENST00000623455 1161 ntBASIC19.93■□□□□ 0.78
RFC4P35249 AL008638.5-201ENST00000623814 1298 ntBASIC19.93■□□□□ 0.78
RFC4P35249 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 AC106820.2-201ENST00000563775 3264 ntBASIC19.93■□□□□ 0.78
RFC4P35249 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC4P35249 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
RFC4P35249 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFC4P35249 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFC4P35249 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RFC4P35249 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RFC4P35249 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.92■□□□□ 0.78
RFC4P35249 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RFC4P35249 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.92■□□□□ 0.78
RFC4P35249 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.92■□□□□ 0.78
RFC4P35249 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.92■□□□□ 0.78
RFC4P35249 AL591846.1-201ENST00000451736 433 ntBASIC19.92■□□□□ 0.78
RFC4P35249 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RFC4P35249 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.92■□□□□ 0.78
RFC4P35249 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.92■□□□□ 0.78
RFC4P35249 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.92■□□□□ 0.78
RFC4P35249 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RFC4P35249 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 RNF216P1-203ENST00000404404 2427 ntBASIC19.92■□□□□ 0.78
RFC4P35249 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.92■□□□□ 0.78
RFC4P35249 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
RFC4P35249 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFC4P35249 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.91■□□□□ 0.78
RFC4P35249 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RFC4P35249 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.91■□□□□ 0.78
RFC4P35249 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.91■□□□□ 0.78
RFC4P35249 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.91■□□□□ 0.78
RFC4P35249 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.91■□□□□ 0.78
RFC4P35249 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
RFC4P35249 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 AKR7A2P1-201ENST00000460134 915 ntBASIC19.91■□□□□ 0.78
RFC4P35249 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.91■□□□□ 0.78
RFC4P35249 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RFC4P35249 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.91■□□□□ 0.78
RFC4P35249 AC107373.2-201ENST00000607735 490 ntBASIC19.91■□□□□ 0.78
RFC4P35249 AHCYP2-201ENST00000430630 1300 ntBASIC19.91■□□□□ 0.78
RFC4P35249 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RFC4P35249 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
RFC4P35249 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RFC4P35249 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms