Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.99■□□□□ 0.31
CTNNA1P35221 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
CTNNA1P35221 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CTNNA1P35221 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CTNNA1P35221 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.99■□□□□ 0.31
CTNNA1P35221 AC079776.4-201ENST00000511039 504 ntBASIC16.99■□□□□ 0.31
CTNNA1P35221 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.99■□□□□ 0.31
CTNNA1P35221 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 AC002347.1-201ENST00000569543 541 ntBASIC16.99■□□□□ 0.31
CTNNA1P35221 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.99■□□□□ 0.31
CTNNA1P35221 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.99■□□□□ 0.31
CTNNA1P35221 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CTNNA1P35221 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CTNNA1P35221 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.98■□□□□ 0.31
CTNNA1P35221 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.98■□□□□ 0.31
CTNNA1P35221 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.98■□□□□ 0.31
CTNNA1P35221 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.98■□□□□ 0.31
CTNNA1P35221 SLC25A6P4-201ENST00000586535 553 ntBASIC16.98■□□□□ 0.31
CTNNA1P35221 MIR4321-201ENST00000592276 80 ntBASIC16.98■□□□□ 0.31
CTNNA1P35221 Z83851.2-201ENST00000609564 659 ntBASIC16.98■□□□□ 0.31
CTNNA1P35221 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.98■□□□□ 0.31
CTNNA1P35221 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.98■□□□□ 0.31
CTNNA1P35221 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 AC020658.6-201ENST00000623564 1870 ntBASIC16.98■□□□□ 0.31
CTNNA1P35221 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.98■□□□□ 0.31
CTNNA1P35221 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.98■□□□□ 0.31
CTNNA1P35221 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNNA1P35221 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTNNA1P35221 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTNNA1P35221 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTNNA1P35221 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTNNA1P35221 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
CTNNA1P35221 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTNNA1P35221 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 SSR4P1-203ENST00000599569 2260 ntBASIC16.97■□□□□ 0.31
CTNNA1P35221 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CTNNA1P35221 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.97■□□□□ 0.31
CTNNA1P35221 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.97■□□□□ 0.31
CTNNA1P35221 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.97■□□□□ 0.31
CTNNA1P35221 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.97■□□□□ 0.31
CTNNA1P35221 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.97■□□□□ 0.31
CTNNA1P35221 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CTNNA1P35221 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.97■□□□□ 0.31
CTNNA1P35221 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.97■□□□□ 0.31
CTNNA1P35221 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.97■□□□□ 0.31
CTNNA1P35221 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTNNA1P35221 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 AP003680.1-201ENST00000598970 3660 ntBASIC16.97■□□□□ 0.31
CTNNA1P35221 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms