Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RXRBP28702 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20.52■□□□□ 0.88
RXRBP28702 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RXRBP28702 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.52■□□□□ 0.88
RXRBP28702 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.52■□□□□ 0.88
RXRBP28702 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.52■□□□□ 0.88
RXRBP28702 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.52■□□□□ 0.88
RXRBP28702 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.52■□□□□ 0.88
RXRBP28702 AC090164.2-201ENST00000611487 516 ntBASIC20.52■□□□□ 0.88
RXRBP28702 AC092053.1-201ENST00000605787 1936 ntBASIC20.52■□□□□ 0.88
RXRBP28702 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
RXRBP28702 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RXRBP28702 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
RXRBP28702 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.52■□□□□ 0.88
RXRBP28702 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RXRBP28702 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.52■□□□□ 0.87
RXRBP28702 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
RXRBP28702 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RXRBP28702 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RXRBP28702 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RXRBP28702 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.52■□□□□ 0.87
RXRBP28702 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.52■□□□□ 0.87
RXRBP28702 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RXRBP28702 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRBP28702 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
RXRBP28702 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC20.51■□□□□ 0.87
RXRBP28702 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RXRBP28702 ACTBP7-201ENST00000418351 1124 ntBASIC20.51■□□□□ 0.87
RXRBP28702 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRBP28702 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.51■□□□□ 0.87
RXRBP28702 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRBP28702 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC20.51■□□□□ 0.87
RXRBP28702 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC20.51■□□□□ 0.87
RXRBP28702 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
RXRBP28702 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.51■□□□□ 0.87
RXRBP28702 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.51■□□□□ 0.87
RXRBP28702 AC007881.3-201ENST00000608897 607 ntBASIC20.51■□□□□ 0.87
RXRBP28702 AC007718.1-201ENST00000621078 280 ntBASIC20.51■□□□□ 0.87
RXRBP28702 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RXRBP28702 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRBP28702 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RXRBP28702 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RXRBP28702 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.51■□□□□ 0.87
RXRBP28702 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RXRBP28702 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 AC148477.4-201ENST00000613430 1793 ntBASIC20.5■□□□□ 0.87
RXRBP28702 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.5■□□□□ 0.87
RXRBP28702 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC20.5■□□□□ 0.87
RXRBP28702 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RXRBP28702 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.5■□□□□ 0.87
RXRBP28702 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.5■□□□□ 0.87
RXRBP28702 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.5■□□□□ 0.87
RXRBP28702 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.5■□□□□ 0.87
RXRBP28702 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.5■□□□□ 0.87
RXRBP28702 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RXRBP28702 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RXRBP28702 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RXRBP28702 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.49■□□□□ 0.87
RXRBP28702 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RXRBP28702 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.49■□□□□ 0.87
RXRBP28702 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RXRBP28702 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RXRBP28702 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.49■□□□□ 0.87
RXRBP28702 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC20.49■□□□□ 0.87
RXRBP28702 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.49■□□□□ 0.87
RXRBP28702 AC244250.3-201ENST00000620749 366 ntBASIC20.49■□□□□ 0.87
RXRBP28702 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RXRBP28702 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms