Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL1P22362 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL1P22362 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCL1P22362 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CCL1P22362 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL1P22362 ACTG1P14-201ENST00000446382 1122 ntBASIC13.79□□□□□ -0.2
CCL1P22362 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.79□□□□□ -0.2
CCL1P22362 SPDYE11-202ENST00000450699 704 ntBASIC13.79□□□□□ -0.2
CCL1P22362 AC079140.1-201ENST00000508039 487 ntBASIC13.79□□□□□ -0.2
CCL1P22362 SPDYE9P-201ENST00000570642 692 ntBASIC13.79□□□□□ -0.2
CCL1P22362 SPDYE10P-202ENST00000612005 668 ntBASIC13.79□□□□□ -0.2
CCL1P22362 SPDYE8P-202ENST00000612377 668 ntBASIC13.79□□□□□ -0.2
CCL1P22362 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL1P22362 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL1P22362 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL1P22362 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCL1P22362 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 AC127383.1-201ENST00000444697 1800 ntBASIC13.78□□□□□ -0.2
CCL1P22362 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL1P22362 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 AC009090.5-201ENST00000624886 2285 ntBASIC13.78□□□□□ -0.2
CCL1P22362 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 C18orf15-201ENST00000623680 2534 ntBASIC13.78□□□□□ -0.2
CCL1P22362 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.78□□□□□ -0.2
CCL1P22362 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.78□□□□□ -0.2
CCL1P22362 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 KRT8P48-201ENST00000515599 1220 ntBASIC13.78□□□□□ -0.2
CCL1P22362 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 AC040169.1-201ENST00000565382 521 ntBASIC13.78□□□□□ -0.2
CCL1P22362 AC026979.3-201ENST00000607315 403 ntBASIC13.78□□□□□ -0.2
CCL1P22362 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms