Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFRSF1BP20333 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC018892.3-201ENST00000623986 2499 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC090616.6-203ENST00000579186 1945 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC006058.4-201ENST00000624016 1670 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 RHOQP3-201ENST00000437982 621 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 RNA5SP419-201ENST00000515908 135 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC096734.2-201ENST00000562054 433 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC018845.2-201ENST00000568326 409 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC104692.2-201ENST00000603054 253 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC105250.1-201ENST00000509378 2057 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 AC011477.6-201ENST00000604980 1927 ntBASIC14.94□□□□□ -0.02
TNFRSF1BP20333 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFRSF1BP20333 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.93□□□□□ -0.02
TNFRSF1BP20333 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms