Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NFKB1P19838 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.33■□□□□ 0.2
NFKB1P19838 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 CYP4F24P-201ENST00000586049 1580 ntBASIC16.33■□□□□ 0.2
NFKB1P19838 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.33■□□□□ 0.2
NFKB1P19838 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NFKB1P19838 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NFKB1P19838 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NFKB1P19838 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 KRT18P13-201ENST00000400056 1290 ntBASIC16.32■□□□□ 0.2
NFKB1P19838 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 SPDYE14P-201ENST00000442619 822 ntBASIC16.32■□□□□ 0.2
NFKB1P19838 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 AC023141.5-201ENST00000458585 616 ntBASIC16.32■□□□□ 0.2
NFKB1P19838 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.32■□□□□ 0.2
NFKB1P19838 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.32■□□□□ 0.2
NFKB1P19838 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.32■□□□□ 0.2
NFKB1P19838 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.32■□□□□ 0.2
NFKB1P19838 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 AC134684.3-201ENST00000641758 218 ntBASIC16.32■□□□□ 0.2
NFKB1P19838 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFKB1P19838 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NFKB1P19838 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NFKB1P19838 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 AC004987.2-201ENST00000395959 1148 ntBASIC16.31■□□□□ 0.2
NFKB1P19838 AC254562.1-201ENST00000417586 456 ntBASIC16.31■□□□□ 0.2
NFKB1P19838 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 AP006288.1-201ENST00000446065 395 ntBASIC16.31■□□□□ 0.2
NFKB1P19838 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NFKB1P19838 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.31■□□□□ 0.2
NFKB1P19838 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.31■□□□□ 0.2
NFKB1P19838 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 REXO1L1P-202ENST00000608646 1974 ntBASIC16.31■□□□□ 0.2
NFKB1P19838 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.31■□□□□ 0.2
NFKB1P19838 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
NFKB1P19838 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.31■□□□□ 0.2
NFKB1P19838 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFKB1P19838 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NFKB1P19838 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NFKB1P19838 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms