Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.63■□□□□ 0.89
MS4A1P11836 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.63■□□□□ 0.89
MS4A1P11836 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A1P11836 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
MS4A1P11836 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MS4A1P11836 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A1P11836 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A1P11836 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.62■□□□□ 0.89
MS4A1P11836 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
MS4A1P11836 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 MIR346-201ENST00000362234 95 ntBASIC20.62■□□□□ 0.89
MS4A1P11836 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.62■□□□□ 0.89
MS4A1P11836 FAM220BP-201ENST00000377689 816 ntBASIC20.62■□□□□ 0.89
MS4A1P11836 YBX2P1-201ENST00000394192 760 ntBASIC20.62■□□□□ 0.89
MS4A1P11836 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.62■□□□□ 0.89
MS4A1P11836 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
MS4A1P11836 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.62■□□□□ 0.89
MS4A1P11836 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.62■□□□□ 0.89
MS4A1P11836 AC243562.1-201ENST00000560672 389 ntBASIC20.62■□□□□ 0.89
MS4A1P11836 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.62■□□□□ 0.89
MS4A1P11836 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.62■□□□□ 0.89
MS4A1P11836 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.62■□□□□ 0.89
MS4A1P11836 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC20.62■□□□□ 0.89
MS4A1P11836 NFIC-211ENST00000641145 8399 ntBASIC20.62■□□□□ 0.89
MS4A1P11836 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A1P11836 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MS4A1P11836 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 FOXO1B-201ENST00000504678 1527 ntBASIC20.62■□□□□ 0.89
MS4A1P11836 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MS4A1P11836 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A1P11836 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MS4A1P11836 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
MS4A1P11836 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MS4A1P11836 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MS4A1P11836 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.61■□□□□ 0.89
MS4A1P11836 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.61■□□□□ 0.89
MS4A1P11836 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.61■□□□□ 0.89
MS4A1P11836 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.61■□□□□ 0.89
MS4A1P11836 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.61■□□□□ 0.89
MS4A1P11836 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
MS4A1P11836 AC142381.1-201ENST00000426099 345 ntBASIC20.61■□□□□ 0.89
MS4A1P11836 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.61■□□□□ 0.89
MS4A1P11836 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
MS4A1P11836 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.61■□□□□ 0.89
MS4A1P11836 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.61■□□□□ 0.89
MS4A1P11836 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
MS4A1P11836 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A1P11836 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC20.61■□□□□ 0.89
MS4A1P11836 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
MS4A1P11836 AC020658.6-201ENST00000623564 1870 ntBASIC20.6■□□□□ 0.89
MS4A1P11836 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.6■□□□□ 0.89
MS4A1P11836 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MS4A1P11836 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC20.6■□□□□ 0.89
MS4A1P11836 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC20.6■□□□□ 0.89
MS4A1P11836 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A1P11836 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A1P11836 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms