Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC27.41■■□□□ 1.98
TOP2AP11388 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TOP2AP11388 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC27.41■■□□□ 1.98
TOP2AP11388 ADM-202ENST00000524948 584 ntTSL 2 BASIC27.41■■□□□ 1.98
TOP2AP11388 TBCB-211ENST00000589996 724 ntTSL 3 BASIC27.41■■□□□ 1.98
TOP2AP11388 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC27.41■■□□□ 1.98
TOP2AP11388 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC27.41■■□□□ 1.98
TOP2AP11388 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
TOP2AP11388 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TOP2AP11388 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC27.4■■□□□ 1.98
TOP2AP11388 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TOP2AP11388 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
TOP2AP11388 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
TOP2AP11388 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC27.4■■□□□ 1.98
TOP2AP11388 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TOP2AP11388 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
TOP2AP11388 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TOP2AP11388 SNX21-203ENST00000372541 771 ntTSL 2 BASIC27.4■■□□□ 1.98
TOP2AP11388 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
TOP2AP11388 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC27.4■■□□□ 1.98
TOP2AP11388 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
TOP2AP11388 POM121L10P-201ENST00000436994 1285 ntBASIC27.4■■□□□ 1.98
TOP2AP11388 TSACC-208ENST00000481479 741 ntTSL 2 BASIC27.4■■□□□ 1.98
TOP2AP11388 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TOP2AP11388 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC27.4■■□□□ 1.98
TOP2AP11388 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TOP2AP11388 KLK11-210ENST00000600362 759 ntTSL 3 BASIC27.4■■□□□ 1.98
TOP2AP11388 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TOP2AP11388 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
TOP2AP11388 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.98
TOP2AP11388 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.98
TOP2AP11388 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC27.39■■□□□ 1.98
TOP2AP11388 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC27.39■■□□□ 1.98
TOP2AP11388 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
TOP2AP11388 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TOP2AP11388 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TOP2AP11388 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TOP2AP11388 MPV17-205ENST00000402310 906 ntTSL 5 BASIC27.39■■□□□ 1.98
TOP2AP11388 TISP43-201ENST00000409793 538 ntTSL 4 BASIC27.39■■□□□ 1.98
TOP2AP11388 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC27.39■■□□□ 1.98
TOP2AP11388 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
TOP2AP11388 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC27.39■■□□□ 1.98
TOP2AP11388 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC27.39■■□□□ 1.98
TOP2AP11388 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TOP2AP11388 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
TOP2AP11388 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.97
TOP2AP11388 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TOP2AP11388 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
TOP2AP11388 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
TOP2AP11388 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
TOP2AP11388 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TOP2AP11388 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC27.38■■□□□ 1.97
TOP2AP11388 POM121L8P-201ENST00000417732 1281 ntBASIC27.38■■□□□ 1.97
TOP2AP11388 DEF8-202ENST00000418391 852 ntTSL 2 BASIC27.38■■□□□ 1.97
TOP2AP11388 POM121L9P-203ENST00000441984 1285 ntBASIC27.38■■□□□ 1.97
TOP2AP11388 COG4-212ENST00000564653 590 ntTSL 5 BASIC27.38■■□□□ 1.97
TOP2AP11388 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC27.38■■□□□ 1.97
TOP2AP11388 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC27.38■■□□□ 1.97
TOP2AP11388 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC27.38■■□□□ 1.97
TOP2AP11388 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC27.38■■□□□ 1.97
TOP2AP11388 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC27.38■■□□□ 1.97
TOP2AP11388 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TOP2AP11388 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC27.38■■□□□ 1.97
TOP2AP11388 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TOP2AP11388 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TOP2AP11388 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TOP2AP11388 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
TOP2AP11388 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
TOP2AP11388 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC27.37■■□□□ 1.97
TOP2AP11388 AL139094.1-201ENST00000405549 1188 ntBASIC27.37■■□□□ 1.97
TOP2AP11388 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC27.37■■□□□ 1.97
TOP2AP11388 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
TOP2AP11388 AC104982.3-201ENST00000581995 514 ntBASIC27.37■■□□□ 1.97
TOP2AP11388 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC27.37■■□□□ 1.97
TOP2AP11388 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC27.37■■□□□ 1.97
TOP2AP11388 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC27.37■■□□□ 1.97
TOP2AP11388 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
TOP2AP11388 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 AC069224.1-201ENST00000566372 1715 ntBASIC27.37■■□□□ 1.97
TOP2AP11388 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TOP2AP11388 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TOP2AP11388 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC27.37■■□□□ 1.97
TOP2AP11388 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TOP2AP11388 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC27.36■■□□□ 1.97
TOP2AP11388 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
TOP2AP11388 MIR3619-201ENST00000579667 83 ntBASIC27.36■■□□□ 1.97
TOP2AP11388 AL451050.2-201ENST00000606967 682 ntBASIC27.36■■□□□ 1.97
TOP2AP11388 ENPP7P14-201ENST00000621765 1040 ntBASIC27.36■■□□□ 1.97
TOP2AP11388 AC015967.2-201ENST00000624092 234 ntBASIC27.36■■□□□ 1.97
TOP2AP11388 AC006435.4-201ENST00000625037 234 ntBASIC27.36■■□□□ 1.97
TOP2AP11388 AL356737.1-201ENST00000634391 234 ntBASIC27.36■■□□□ 1.97
TOP2AP11388 AC138627.1-207ENST00000641560 1006 ntBASIC27.36■■□□□ 1.97
TOP2AP11388 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
TOP2AP11388 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms