Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LAMP1P11279 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LAMP1P11279 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.22■□□□□ 0.03
LAMP1P11279 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
LAMP1P11279 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.22■□□□□ 0.03
LAMP1P11279 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.22■□□□□ 0.03
LAMP1P11279 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMP1P11279 AC142381.1-201ENST00000426099 345 ntBASIC15.22■□□□□ 0.03
LAMP1P11279 FAM58CP-201ENST00000435741 640 ntBASIC15.22■□□□□ 0.03
LAMP1P11279 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMP1P11279 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMP1P11279 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
LAMP1P11279 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.22■□□□□ 0.03
LAMP1P11279 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.22■□□□□ 0.03
LAMP1P11279 AC024267.1-201ENST00000582320 895 ntBASIC15.22■□□□□ 0.03
LAMP1P11279 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMP1P11279 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.22■□□□□ 0.03
LAMP1P11279 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
LAMP1P11279 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LAMP1P11279 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LAMP1P11279 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LAMP1P11279 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LAMP1P11279 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LAMP1P11279 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMP1P11279 BNIP3P1-202ENST00000550043 1585 ntBASIC15.21■□□□□ 0.03
LAMP1P11279 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LAMP1P11279 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 MIR940-201ENST00000401276 94 ntBASIC15.21■□□□□ 0.03
LAMP1P11279 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMP1P11279 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.21■□□□□ 0.03
LAMP1P11279 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMP1P11279 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.21■□□□□ 0.03
LAMP1P11279 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
LAMP1P11279 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMP1P11279 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMP1P11279 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.21■□□□□ 0.03
LAMP1P11279 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LAMP1P11279 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LAMP1P11279 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LAMP1P11279 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LAMP1P11279 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LAMP1P11279 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LAMP1P11279 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LAMP1P11279 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.21■□□□□ 0.02
LAMP1P11279 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.2■□□□□ 0.02
LAMP1P11279 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.2■□□□□ 0.02
LAMP1P11279 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LAMP1P11279 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LAMP1P11279 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LAMP1P11279 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
LAMP1P11279 AC105250.1-201ENST00000509378 2057 ntBASIC15.2■□□□□ 0.02
LAMP1P11279 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LAMP1P11279 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.2■□□□□ 0.02
LAMP1P11279 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LAMP1P11279 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LAMP1P11279 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LAMP1P11279 AC026396.1-201ENST00000419388 421 ntBASIC15.2■□□□□ 0.02
LAMP1P11279 ADH5P3-201ENST00000433842 1137 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms