Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 NFIC-211ENST00000641145 8399 ntBASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 OR8S1-201ENST00000310194 1080 ntBASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 DGCR5-201ENST00000399539 862 ntBASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AC011495.1-201ENST00000498085 584 ntBASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AC092337.1-201ENST00000568699 1129 ntBASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AC004790.1-201ENST00000612686 536 ntBASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 AL513523.2-202ENST00000427283 2040 ntBASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 AC004987.2-201ENST00000395959 1148 ntBASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40ALP0C0E4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AC022188.1-201ENST00000620960 1664 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 AL136982.4-201ENST00000437689 1740 ntBASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40ALP0C0E4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms