Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.36■□□□□ 0.53
TPM2P07951 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM2P07951 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM2P07951 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM2P07951 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM2P07951 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM2P07951 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TPM2P07951 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM2P07951 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM2P07951 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TPM2P07951 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM2P07951 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TPM2P07951 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM2P07951 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TPM2P07951 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TPM2P07951 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TPM2P07951 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TPM2P07951 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM2P07951 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TPM2P07951 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM2P07951 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM2P07951 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 LINC01711-201ENST00000598340 967 ntBASIC18.35■□□□□ 0.53
TPM2P07951 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.35■□□□□ 0.53
TPM2P07951 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 AL671710.1-201ENST00000610245 2349 ntBASIC18.35■□□□□ 0.53
TPM2P07951 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.35■□□□□ 0.53
TPM2P07951 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TPM2P07951 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM2P07951 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM2P07951 AC131009.4-201ENST00000624048 1740 ntBASIC18.35■□□□□ 0.53
TPM2P07951 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM2P07951 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
TPM2P07951 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 CR383656.2-201ENST00000548656 2254 ntBASIC18.34■□□□□ 0.53
TPM2P07951 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM2P07951 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM2P07951 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM2P07951 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM2P07951 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.34■□□□□ 0.53
TPM2P07951 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.34■□□□□ 0.53
TPM2P07951 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM2P07951 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM2P07951 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.34■□□□□ 0.53
TPM2P07951 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM2P07951 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM2P07951 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 AC008608.2-201ENST00000606089 416 ntBASIC18.34■□□□□ 0.53
TPM2P07951 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TPM2P07951 AC004706.3-202ENST00000621574 984 ntBASIC18.34■□□□□ 0.53
TPM2P07951 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TPM2P07951 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM2P07951 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TPM2P07951 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM2P07951 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TPM2P07951 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.33■□□□□ 0.53
TPM2P07951 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM2P07951 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TPM2P07951 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM2P07951 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TPM2P07951 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM2P07951 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms