Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 SPDYE17-201ENST00000412399 783 ntBASIC16.24■□□□□ 0.19
HLA-DQB2P05538 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 AC125807.1-201ENST00000483097 614 ntBASIC16.24■□□□□ 0.19
HLA-DQB2P05538 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 AL079307.3-201ENST00000556114 283 ntBASIC16.24■□□□□ 0.19
HLA-DQB2P05538 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 AC015911.4-201ENST00000588022 1070 ntBASIC16.24■□□□□ 0.19
HLA-DQB2P05538 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 AL080243.2-201ENST00000418783 582 ntBASIC16.23■□□□□ 0.19
HLA-DQB2P05538 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 AC051619.7-201ENST00000568314 623 ntBASIC16.23■□□□□ 0.19
HLA-DQB2P05538 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 AL450472.2-201ENST00000603663 1156 ntBASIC16.23■□□□□ 0.19
HLA-DQB2P05538 AL589739.1-201ENST00000607720 493 ntBASIC16.23■□□□□ 0.19
HLA-DQB2P05538 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 SPDYE12P-201ENST00000618416 771 ntBASIC16.23■□□□□ 0.19
HLA-DQB2P05538 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB2P05538 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 HIST3H2BA-201ENST00000436555 524 ntBASIC16.22■□□□□ 0.19
HLA-DQB2P05538 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms