Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.07■□□□□ 0
PDGFAP04085 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.07■□□□□ 0
PDGFAP04085 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.07■□□□□ 0
PDGFAP04085 AP006294.1-201ENST00000415407 339 ntBASIC15.07■□□□□ 0
PDGFAP04085 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 DOC2GP-202ENST00000514950 1163 ntBASIC15.07■□□□□ 0
PDGFAP04085 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.07■□□□□ 0
PDGFAP04085 AC044860.1-202ENST00000559481 777 ntBASIC15.07■□□□□ 0
PDGFAP04085 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.07■□□□□ 0
PDGFAP04085 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
PDGFAP04085 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.07■□□□□ 0
PDGFAP04085 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDGFAP04085 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PDGFAP04085 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.06■□□□□ 0
PDGFAP04085 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
PDGFAP04085 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
PDGFAP04085 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
PDGFAP04085 MIR1909-201ENST00000411312 80 ntBASIC15.06■□□□□ 0
PDGFAP04085 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 ACA64.2-201ENST00000459014 129 ntBASIC15.06■□□□□ 0
PDGFAP04085 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
PDGFAP04085 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.06■□□□□ 0
PDGFAP04085 ZNF890P-202ENST00000530367 1156 ntBASIC15.06■□□□□ 0
PDGFAP04085 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.06■□□□□ 0
PDGFAP04085 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.06■□□□□ 0
PDGFAP04085 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 AC017083.2-201ENST00000608069 979 ntBASIC15.06■□□□□ 0
PDGFAP04085 MIR6799-201ENST00000620297 69 ntBASIC15.06■□□□□ 0
PDGFAP04085 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.06■□□□□ 0
PDGFAP04085 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.06■□□□□ 0
PDGFAP04085 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.06■□□□□ 0
PDGFAP04085 BTBD7P1-201ENST00000447253 1453 ntBASIC15.06■□□□□ 0
PDGFAP04085 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDGFAP04085 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PDGFAP04085 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFAP04085 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFAP04085 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDGFAP04085 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDGFAP04085 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDGFAP04085 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDGFAP04085 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.05■□□□□ 0
PDGFAP04085 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFAP04085 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.05■□□□□ 0
PDGFAP04085 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFAP04085 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
PDGFAP04085 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
PDGFAP04085 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 AC112492.5-201ENST00000421897 457 ntBASIC15.05■□□□□ -0
PDGFAP04085 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.05■□□□□ -0
PDGFAP04085 RN7SL618P-201ENST00000477850 296 ntBASIC15.05■□□□□ -0
PDGFAP04085 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.05■□□□□ -0
PDGFAP04085 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.05■□□□□ -0
PDGFAP04085 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.05■□□□□ -0
PDGFAP04085 AL162274.1-201ENST00000617191 1098 ntBASIC15.05■□□□□ -0
PDGFAP04085 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.05■□□□□ -0
PDGFAP04085 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
PDGFAP04085 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms