Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.48■□□□□ 0.39
VTNP04004 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.48■□□□□ 0.39
VTNP04004 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 AC104596.2-201ENST00000512793 793 ntBASIC17.48■□□□□ 0.39
VTNP04004 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.48■□□□□ 0.39
VTNP04004 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
VTNP04004 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
VTNP04004 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.48■□□□□ 0.39
VTNP04004 TMEM261P1-201ENST00000604899 340 ntBASIC17.48■□□□□ 0.39
VTNP04004 AL008721.1-201ENST00000609964 604 ntBASIC17.48■□□□□ 0.39
VTNP04004 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.48■□□□□ 0.39
VTNP04004 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.48■□□□□ 0.39
VTNP04004 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
VTNP04004 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VTNP04004 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
VTNP04004 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VTNP04004 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.47■□□□□ 0.39
VTNP04004 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.47■□□□□ 0.39
VTNP04004 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.47■□□□□ 0.39
VTNP04004 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.47■□□□□ 0.39
VTNP04004 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 HILS1-202ENST00000545329 423 ntBASIC17.47■□□□□ 0.39
VTNP04004 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.47■□□□□ 0.39
VTNP04004 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.47■□□□□ 0.39
VTNP04004 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.47■□□□□ 0.39
VTNP04004 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VTNP04004 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VTNP04004 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VTNP04004 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.47■□□□□ 0.39
VTNP04004 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VTNP04004 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTNP04004 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 AL596087.1-201ENST00000400979 1969 ntBASIC17.46■□□□□ 0.39
VTNP04004 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.46■□□□□ 0.39
VTNP04004 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.46■□□□□ 0.39
VTNP04004 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.46■□□□□ 0.39
VTNP04004 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
VTNP04004 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.46■□□□□ 0.39
VTNP04004 TMEM14DP-201ENST00000422205 345 ntBASIC17.46■□□□□ 0.39
VTNP04004 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms