Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VAPBO95292 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
VAPBO95292 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.16■□□□□ 0.18
VAPBO95292 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
VAPBO95292 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VAPBO95292 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
VAPBO95292 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VAPBO95292 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
VAPBO95292 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.15■□□□□ 0.18
VAPBO95292 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.15■□□□□ 0.18
VAPBO95292 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 ACTG1P14-201ENST00000446382 1122 ntBASIC16.15■□□□□ 0.18
VAPBO95292 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 TIMM8BP1-201ENST00000452384 211 ntBASIC16.15■□□□□ 0.18
VAPBO95292 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.15■□□□□ 0.18
VAPBO95292 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.15■□□□□ 0.18
VAPBO95292 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.15■□□□□ 0.18
VAPBO95292 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.15■□□□□ 0.18
VAPBO95292 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.15■□□□□ 0.18
VAPBO95292 LINC01225-203ENST00000563550 1244 ntBASIC16.15■□□□□ 0.18
VAPBO95292 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.15■□□□□ 0.18
VAPBO95292 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
VAPBO95292 AL671883.3-201ENST00000603274 991 ntBASIC16.15■□□□□ 0.18
VAPBO95292 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.15■□□□□ 0.18
VAPBO95292 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.15■□□□□ 0.18
VAPBO95292 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.15■□□□□ 0.18
VAPBO95292 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VAPBO95292 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
VAPBO95292 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.14■□□□□ 0.18
VAPBO95292 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.14■□□□□ 0.18
VAPBO95292 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.14■□□□□ 0.18
VAPBO95292 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
VAPBO95292 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.14■□□□□ 0.17
VAPBO95292 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.14■□□□□ 0.17
VAPBO95292 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 CICP13-201ENST00000422015 2789 ntBASIC16.14■□□□□ 0.17
VAPBO95292 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.14■□□□□ 0.17
VAPBO95292 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 MIR346-201ENST00000362234 95 ntBASIC16.14■□□□□ 0.17
VAPBO95292 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.14■□□□□ 0.17
VAPBO95292 HTR5BP-201ENST00000430851 1154 ntBASIC16.14■□□□□ 0.17
VAPBO95292 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.14■□□□□ 0.17
VAPBO95292 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
VAPBO95292 ALG1L5P-201ENST00000482043 771 ntBASIC16.14■□□□□ 0.17
VAPBO95292 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.14■□□□□ 0.17
VAPBO95292 RNA5SP410-201ENST00000516285 106 ntBASIC16.14■□□□□ 0.17
VAPBO95292 IGHV3-62-201ENST00000520057 340 ntBASIC16.14■□□□□ 0.17
VAPBO95292 AP000842.3-202ENST00000569238 1080 ntBASIC16.14■□□□□ 0.17
VAPBO95292 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.14■□□□□ 0.17
VAPBO95292 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VAPBO95292 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
VAPBO95292 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.14■□□□□ 0.17
VAPBO95292 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VAPBO95292 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.14■□□□□ 0.17
VAPBO95292 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
VAPBO95292 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VAPBO95292 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.13■□□□□ 0.17
VAPBO95292 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VAPBO95292 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VAPBO95292 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms