Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SNCGO76070 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.85□□□□□ -0.67
SNCGO76070 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC10.85□□□□□ -0.67
SNCGO76070 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC10.85□□□□□ -0.67
SNCGO76070 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC10.85□□□□□ -0.67
SNCGO76070 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.85□□□□□ -0.67
SNCGO76070 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC10.85□□□□□ -0.67
SNCGO76070 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SNCGO76070 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SNCGO76070 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC10.84□□□□□ -0.67
SNCGO76070 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 LINC00552-201ENST00000625151 2579 ntBASIC10.84□□□□□ -0.67
SNCGO76070 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC10.84□□□□□ -0.67
SNCGO76070 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 AP000350.6-201ENST00000609510 5637 ntBASIC10.84□□□□□ -0.67
SNCGO76070 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SNCGO76070 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SNCGO76070 AC073195.1-201ENST00000607241 877 ntBASIC10.84□□□□□ -0.67
SNCGO76070 AC080038.1-201ENST00000611274 1154 ntBASIC10.84□□□□□ -0.67
SNCGO76070 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SNCGO76070 AC092865.7-201ENST00000641832 219 ntBASIC10.84□□□□□ -0.67
SNCGO76070 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 GPR89P-201ENST00000407924 1495 ntBASIC10.84□□□□□ -0.67
SNCGO76070 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SNCGO76070 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 AC010491.1-201ENST00000563101 2797 ntBASIC10.84□□□□□ -0.67
SNCGO76070 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 AL603832.2-201ENST00000566195 2125 ntBASIC10.84□□□□□ -0.67
SNCGO76070 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SNCGO76070 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.84□□□□□ -0.67
SNCGO76070 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 AC004899.2-201ENST00000622993 3860 ntBASIC10.83□□□□□ -0.68
SNCGO76070 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC10.83□□□□□ -0.68
SNCGO76070 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 AL021920.2-201ENST00000624828 1351 ntBASIC10.83□□□□□ -0.68
SNCGO76070 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms