Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE3O75131 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE3O75131 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE3O75131 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE3O75131 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 AC239800.4-201ENST00000603712 296 ntBASIC15.47■□□□□ 0.07
CPNE3O75131 AL603756.1-201ENST00000606511 2163 ntBASIC15.47■□□□□ 0.07
CPNE3O75131 AC026979.3-201ENST00000607315 403 ntBASIC15.47■□□□□ 0.07
CPNE3O75131 GGT4P-201ENST00000623672 1708 ntBASIC15.47■□□□□ 0.07
CPNE3O75131 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CPNE3O75131 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE3O75131 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE3O75131 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE3O75131 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE3O75131 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CPNE3O75131 AC087499.5-201ENST00000452760 1342 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE3O75131 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE3O75131 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CPNE3O75131 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE3O75131 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CPNE3O75131 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE3O75131 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE3O75131 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.46■□□□□ 0.07
CPNE3O75131 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 AC015922.1-201ENST00000421102 1152 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.46■□□□□ 0.07
CPNE3O75131 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CPNE3O75131 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 SERBP1P5-201ENST00000510079 1181 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.46■□□□□ 0.07
CPNE3O75131 BANF1P1-201ENST00000553684 263 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.46■□□□□ 0.07
CPNE3O75131 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 AF228730.6-201ENST00000641497 218 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 AC084121.3-201ENST00000641716 218 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 AC105233.6-201ENST00000642093 218 ntBASIC15.46■□□□□ 0.07
CPNE3O75131 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE3O75131 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE3O75131 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.46■□□□□ 0.06
CPNE3O75131 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE3O75131 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.46■□□□□ 0.06
CPNE3O75131 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.06
CPNE3O75131 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.46■□□□□ 0.06
CPNE3O75131 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.46■□□□□ 0.06
CPNE3O75131 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.46■□□□□ 0.06
CPNE3O75131 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE3O75131 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE3O75131 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CPNE3O75131 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms