Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.63■□□□□ 0.57
CTNND1O60716 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.63■□□□□ 0.57
CTNND1O60716 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 KLF2P4-201ENST00000451959 1225 ntBASIC18.63■□□□□ 0.57
CTNND1O60716 CTBP2P5-201ENST00000454986 1264 ntBASIC18.63■□□□□ 0.57
CTNND1O60716 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.63■□□□□ 0.57
CTNND1O60716 SLED1-202ENST00000512051 380 ntBASIC18.63■□□□□ 0.57
CTNND1O60716 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.63■□□□□ 0.57
CTNND1O60716 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 AC124283.3-201ENST00000570869 594 ntBASIC18.63■□□□□ 0.57
CTNND1O60716 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CTNND1O60716 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNND1O60716 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNND1O60716 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CTNND1O60716 AC005229.1-201ENST00000392885 409 ntBASIC18.62■□□□□ 0.57
CTNND1O60716 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.62■□□□□ 0.57
CTNND1O60716 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.62■□□□□ 0.57
CTNND1O60716 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.62■□□□□ 0.57
CTNND1O60716 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.62■□□□□ 0.57
CTNND1O60716 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.62■□□□□ 0.57
CTNND1O60716 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.62■□□□□ 0.57
CTNND1O60716 AC093525.8-201ENST00000624099 1342 ntBASIC18.62■□□□□ 0.57
CTNND1O60716 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.62■□□□□ 0.57
CTNND1O60716 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CTNND1O60716 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
CTNND1O60716 INTS4P2-202ENST00000614726 2019 ntBASIC18.62■□□□□ 0.57
CTNND1O60716 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 NKILA-202ENST00000614771 2598 ntBASIC18.62■□□□□ 0.57
CTNND1O60716 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTNND1O60716 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CTNND1O60716 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNND1O60716 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CTNND1O60716 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 AC011676.5-201ENST00000624864 2660 ntBASIC18.61■□□□□ 0.57
CTNND1O60716 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.61■□□□□ 0.57
CTNND1O60716 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.61■□□□□ 0.57
CTNND1O60716 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CTNND1O60716 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.61■□□□□ 0.57
CTNND1O60716 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.61■□□□□ 0.57
CTNND1O60716 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CTNND1O60716 FAM86MP-201ENST00000340703 885 ntBASIC18.61■□□□□ 0.57
CTNND1O60716 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 SOCS2P1-201ENST00000417727 557 ntBASIC18.61■□□□□ 0.57
CTNND1O60716 AC136604.1-201ENST00000418535 575 ntBASIC18.61■□□□□ 0.57
CTNND1O60716 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.61■□□□□ 0.57
CTNND1O60716 PTP4A1P2-201ENST00000546033 454 ntBASIC18.61■□□□□ 0.57
CTNND1O60716 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CTNND1O60716 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.61■□□□□ 0.57
CTNND1O60716 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.61■□□□□ 0.57
CTNND1O60716 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
CTNND1O60716 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms