Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.36■□□□□ 0.37
EXTL3O43909 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
EXTL3O43909 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
EXTL3O43909 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.35■□□□□ 0.37
EXTL3O43909 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
EXTL3O43909 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
EXTL3O43909 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.35■□□□□ 0.37
EXTL3O43909 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 RN7SL618P-201ENST00000477850 296 ntBASIC17.35■□□□□ 0.37
EXTL3O43909 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 AC010336.2-201ENST00000564226 506 ntBASIC17.35■□□□□ 0.37
EXTL3O43909 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
EXTL3O43909 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.35■□□□□ 0.37
EXTL3O43909 AL844908.2-201ENST00000609461 460 ntBASIC17.35■□□□□ 0.37
EXTL3O43909 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.35■□□□□ 0.37
EXTL3O43909 AP005117.1-202ENST00000581724 1908 ntBASIC17.35■□□□□ 0.37
EXTL3O43909 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
EXTL3O43909 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EXTL3O43909 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.34■□□□□ 0.37
EXTL3O43909 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.34■□□□□ 0.37
EXTL3O43909 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.34■□□□□ 0.37
EXTL3O43909 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 BASP1P1-201ENST00000430708 665 ntBASIC17.34■□□□□ 0.37
EXTL3O43909 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.34■□□□□ 0.37
EXTL3O43909 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.34■□□□□ 0.37
EXTL3O43909 AC093214.1-201ENST00000511688 1107 ntBASIC17.34■□□□□ 0.37
EXTL3O43909 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.34■□□□□ 0.37
EXTL3O43909 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 HNRNPUP1-201ENST00000554987 333 ntBASIC17.34■□□□□ 0.37
EXTL3O43909 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
EXTL3O43909 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.34■□□□□ 0.37
EXTL3O43909 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.34■□□□□ 0.37
EXTL3O43909 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
EXTL3O43909 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.34■□□□□ 0.37
EXTL3O43909 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.34■□□□□ 0.37
EXTL3O43909 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
EXTL3O43909 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
EXTL3O43909 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EXTL3O43909 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EXTL3O43909 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
EXTL3O43909 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.33■□□□□ 0.37
EXTL3O43909 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EXTL3O43909 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EXTL3O43909 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.33■□□□□ 0.37
EXTL3O43909 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.33■□□□□ 0.37
EXTL3O43909 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.33■□□□□ 0.37
EXTL3O43909 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EXTL3O43909 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms