Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A2O43868 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A2O43868 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SLC28A2O43868 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC28A2O43868 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC28A2O43868 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC28A2O43868 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC28A2O43868 AC005412.3-201ENST00000580309 715 ntBASIC15.52■□□□□ 0.08
SLC28A2O43868 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC28A2O43868 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC28A2O43868 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SLC28A2O43868 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC28A2O43868 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SLC28A2O43868 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC28A2O43868 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC28A2O43868 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC28A2O43868 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
SLC28A2O43868 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC28A2O43868 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC28A2O43868 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC28A2O43868 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC28A2O43868 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 PCGF3-213ENST00000620529 1899 ntBASIC15.51■□□□□ 0.07
SLC28A2O43868 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 MIR658-201ENST00000385210 100 ntBASIC15.51■□□□□ 0.07
SLC28A2O43868 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 HCG4-201ENST00000418983 998 ntBASIC15.51■□□□□ 0.07
SLC28A2O43868 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC28A2O43868 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.51■□□□□ 0.07
SLC28A2O43868 AC027369.6-201ENST00000525520 931 ntBASIC15.51■□□□□ 0.07
SLC28A2O43868 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC28A2O43868 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC28A2O43868 KRT8P23-201ENST00000560090 1207 ntBASIC15.51■□□□□ 0.07
SLC28A2O43868 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC28A2O43868 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC28A2O43868 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC28A2O43868 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 GPAA1P2-202ENST00000606848 1787 ntBASIC15.51■□□□□ 0.07
SLC28A2O43868 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC28A2O43868 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms