Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 CICP13-201ENST00000422015 2789 ntBASIC16.01■□□□□ 0.15
LDB2O43679 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
LDB2O43679 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.01■□□□□ 0.15
LDB2O43679 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 SPDYE17-201ENST00000412399 783 ntBASIC16.01■□□□□ 0.15
LDB2O43679 SPDYE7P-202ENST00000420373 878 ntBASIC16.01■□□□□ 0.15
LDB2O43679 TSEN15P1-201ENST00000423257 515 ntBASIC16.01■□□□□ 0.15
LDB2O43679 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.01■□□□□ 0.15
LDB2O43679 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 AC069262.1-201ENST00000539058 672 ntBASIC16.01■□□□□ 0.15
LDB2O43679 AC027796.2-201ENST00000575326 344 ntBASIC16.01■□□□□ 0.15
LDB2O43679 MIR4313-201ENST00000580760 101 ntBASIC16.01■□□□□ 0.15
LDB2O43679 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB2O43679 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB2O43679 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LDB2O43679 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB2O43679 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LDB2O43679 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB2O43679 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LDB2O43679 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
LDB2O43679 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB2O43679 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB2O43679 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16■□□□□ 0.15
LDB2O43679 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16■□□□□ 0.15
LDB2O43679 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16■□□□□ 0.15
LDB2O43679 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16■□□□□ 0.15
LDB2O43679 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LDB2O43679 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16■□□□□ 0.15
LDB2O43679 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16■□□□□ 0.15
LDB2O43679 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LDB2O43679 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16■□□□□ 0.15
LDB2O43679 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16■□□□□ 0.15
LDB2O43679 PHKG1P2-201ENST00000457537 863 ntBASIC16■□□□□ 0.15
LDB2O43679 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16■□□□□ 0.15
LDB2O43679 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16■□□□□ 0.15
LDB2O43679 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16■□□□□ 0.15
LDB2O43679 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LDB2O43679 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16■□□□□ 0.15
LDB2O43679 AL450472.2-201ENST00000603663 1156 ntBASIC16■□□□□ 0.15
LDB2O43679 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16■□□□□ 0.15
LDB2O43679 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16■□□□□ 0.15
LDB2O43679 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16■□□□□ 0.15
LDB2O43679 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16■□□□□ 0.15
LDB2O43679 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
LDB2O43679 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LDB2O43679 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LDB2O43679 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB2O43679 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16■□□□□ 0.15
LDB2O43679 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
LDB2O43679 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB2O43679 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 AC092850.2-201ENST00000623821 2697 ntBASIC15.99■□□□□ 0.15
LDB2O43679 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.99■□□□□ 0.15
LDB2O43679 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 1249.6 ms