Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD6O43541 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SMAD6O43541 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.14■□□□□ 0.17
SMAD6O43541 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.14■□□□□ 0.17
SMAD6O43541 HNRNPUP1-201ENST00000554987 333 ntBASIC16.14■□□□□ 0.17
SMAD6O43541 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SMAD6O43541 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD6O43541 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.14■□□□□ 0.17
SMAD6O43541 AF228730.6-201ENST00000641497 218 ntBASIC16.14■□□□□ 0.17
SMAD6O43541 AC084121.3-201ENST00000641716 218 ntBASIC16.14■□□□□ 0.17
SMAD6O43541 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD6O43541 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD6O43541 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD6O43541 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD6O43541 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SMAD6O43541 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD6O43541 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.14■□□□□ 0.17
SMAD6O43541 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD6O43541 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMAD6O43541 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SMAD6O43541 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 AC112504.1-201ENST00000623415 1841 ntBASIC16.13■□□□□ 0.17
SMAD6O43541 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SMAD6O43541 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.13■□□□□ 0.17
SMAD6O43541 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.13■□□□□ 0.17
SMAD6O43541 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.13■□□□□ 0.17
SMAD6O43541 API5-211ENST00000534695 560 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.13■□□□□ 0.17
SMAD6O43541 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.13■□□□□ 0.17
SMAD6O43541 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.13■□□□□ 0.17
SMAD6O43541 AC023310.3-201ENST00000557027 670 ntBASIC16.13■□□□□ 0.17
SMAD6O43541 AC100756.1-201ENST00000562736 682 ntBASIC16.13■□□□□ 0.17
SMAD6O43541 AC138749.3-201ENST00000567691 622 ntBASIC16.13■□□□□ 0.17
SMAD6O43541 AC092337.1-201ENST00000568699 1129 ntBASIC16.13■□□□□ 0.17
SMAD6O43541 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 AC097359.3-201ENST00000603982 1210 ntBASIC16.13■□□□□ 0.17
SMAD6O43541 AC116165.1-201ENST00000611806 668 ntBASIC16.13■□□□□ 0.17
SMAD6O43541 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SMAD6O43541 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD6O43541 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SMAD6O43541 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.12■□□□□ 0.17
SMAD6O43541 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.12■□□□□ 0.17
SMAD6O43541 RPL13P2-201ENST00000440687 659 ntBASIC16.12■□□□□ 0.17
SMAD6O43541 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
SMAD6O43541 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.12■□□□□ 0.17
SMAD6O43541 SPDYE22P-201ENST00000582158 798 ntBASIC16.12■□□□□ 0.17
SMAD6O43541 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.12■□□□□ 0.17
SMAD6O43541 AL662799.1-202ENST00000614205 422 ntBASIC16.12■□□□□ 0.17
SMAD6O43541 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SMAD6O43541 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD6O43541 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD6O43541 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms