Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.01■□□□□ 0.15
PHGDHO43175 SLC25A1P1-201ENST00000528351 927 ntBASIC16.01■□□□□ 0.15
PHGDHO43175 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.01■□□□□ 0.15
PHGDHO43175 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.01■□□□□ 0.15
PHGDHO43175 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.01■□□□□ 0.15
PHGDHO43175 AC099522.2-201ENST00000607001 744 ntBASIC16.01■□□□□ 0.15
PHGDHO43175 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PHGDHO43175 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.01■□□□□ 0.15
PHGDHO43175 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.01■□□□□ 0.15
PHGDHO43175 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
PHGDHO43175 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PHGDHO43175 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.01■□□□□ 0.15
PHGDHO43175 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 AC020658.6-201ENST00000623564 1870 ntBASIC16■□□□□ 0.15
PHGDHO43175 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16■□□□□ 0.15
PHGDHO43175 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16■□□□□ 0.15
PHGDHO43175 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16■□□□□ 0.15
PHGDHO43175 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
PHGDHO43175 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PHGDHO43175 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16■□□□□ 0.15
PHGDHO43175 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PHGDHO43175 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.99■□□□□ 0.15
PHGDHO43175 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.99■□□□□ 0.15
PHGDHO43175 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.99■□□□□ 0.15
PHGDHO43175 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PHGDHO43175 AC002056.1-201ENST00000395613 760 ntBASIC15.99■□□□□ 0.15
PHGDHO43175 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.99■□□□□ 0.15
PHGDHO43175 AL590627.1-203ENST00000421194 1026 ntBASIC15.99■□□□□ 0.15
PHGDHO43175 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.99■□□□□ 0.15
PHGDHO43175 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.99■□□□□ 0.15
PHGDHO43175 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.99■□□□□ 0.15
PHGDHO43175 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.99■□□□□ 0.15
PHGDHO43175 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.99■□□□□ 0.15
PHGDHO43175 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.99■□□□□ 0.15
PHGDHO43175 AL121894.2-201ENST00000602977 491 ntBASIC15.99■□□□□ 0.15
PHGDHO43175 AC092127.1-201ENST00000567093 3455 ntBASIC15.99■□□□□ 0.15
PHGDHO43175 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PHGDHO43175 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PHGDHO43175 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.99■□□□□ 0.15
PHGDHO43175 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.99■□□□□ 0.15
PHGDHO43175 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms