Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN1O15353 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN1O15353 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.08■□□□□ 0.65
FOXN1O15353 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXN1O15353 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
FOXN1O15353 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXN1O15353 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXN1O15353 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXN1O15353 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN1O15353 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
FOXN1O15353 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN1O15353 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.08■□□□□ 0.64
FOXN1O15353 RPL17P11-201ENST00000417593 544 ntBASIC19.08■□□□□ 0.64
FOXN1O15353 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
FOXN1O15353 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.08■□□□□ 0.64
FOXN1O15353 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN1O15353 SERBP1P3-201ENST00000459980 809 ntBASIC19.08■□□□□ 0.64
FOXN1O15353 PRYP6-201ENST00000514804 343 ntBASIC19.08■□□□□ 0.64
FOXN1O15353 MIR5189-201ENST00000577370 114 ntBASIC19.08■□□□□ 0.64
FOXN1O15353 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.08■□□□□ 0.64
FOXN1O15353 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.08■□□□□ 0.64
FOXN1O15353 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN1O15353 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
FOXN1O15353 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN1O15353 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN1O15353 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXN1O15353 AC008894.3-201ENST00000624324 3103 ntBASIC19.07■□□□□ 0.64
FOXN1O15353 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
FOXN1O15353 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
FOXN1O15353 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 AC005052.1-201ENST00000625181 2492 ntBASIC19.07■□□□□ 0.64
FOXN1O15353 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
FOXN1O15353 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
FOXN1O15353 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 MIR33B-201ENST00000385104 96 ntBASIC19.07■□□□□ 0.64
FOXN1O15353 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.07■□□□□ 0.64
FOXN1O15353 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXN1O15353 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXN1O15353 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXN1O15353 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
FOXN1O15353 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXN1O15353 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXN1O15353 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN1O15353 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
FOXN1O15353 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN1O15353 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
FOXN1O15353 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXN1O15353 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN1O15353 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXN1O15353 AKR7A2P1-201ENST00000460134 915 ntBASIC19.06■□□□□ 0.64
FOXN1O15353 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms