Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD1O14646 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHD1O14646 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD1O14646 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD1O14646 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD1O14646 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD1O14646 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD1O14646 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD1O14646 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD1O14646 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC25.2■■□□□ 1.62
CHD1O14646 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC25.2■■□□□ 1.62
CHD1O14646 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC25.2■■□□□ 1.62
CHD1O14646 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1O14646 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1O14646 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1O14646 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1O14646 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD1O14646 AC074138.1-201ENST00000611182 1303 ntBASIC25.19■■□□□ 1.62
CHD1O14646 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD1O14646 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1O14646 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD1O14646 NAGK-204ENST00000443872 878 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD1O14646 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1O14646 AC090857.1-201ENST00000527400 390 ntBASIC25.19■■□□□ 1.62
CHD1O14646 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD1O14646 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CHD1O14646 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD1O14646 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1O14646 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC25.18■■□□□ 1.62
CHD1O14646 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1O14646 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1O14646 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1O14646 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC25.18■■□□□ 1.62
CHD1O14646 NSD1-211ENST00000511258 809 ntTSL 3 BASIC25.18■■□□□ 1.62
CHD1O14646 TMCO5B-205ENST00000530020 894 ntBASIC25.18■■□□□ 1.62
CHD1O14646 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC25.18■■□□□ 1.62
CHD1O14646 DNM1P30-201ENST00000563586 452 ntBASIC25.18■■□□□ 1.62
CHD1O14646 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC25.18■■□□□ 1.62
CHD1O14646 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC25.18■■□□□ 1.62
CHD1O14646 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1O14646 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CHD1O14646 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CHD1O14646 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1O14646 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC25.18■■□□□ 1.62
CHD1O14646 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD1O14646 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC25.17■■□□□ 1.62
CHD1O14646 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC25.17■■□□□ 1.62
CHD1O14646 AL157792.1-201ENST00000488281 530 ntBASIC25.17■■□□□ 1.62
CHD1O14646 AP002803.1-201ENST00000528836 498 ntBASIC25.17■■□□□ 1.62
CHD1O14646 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC25.17■■□□□ 1.62
CHD1O14646 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD1O14646 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1O14646 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1O14646 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
CHD1O14646 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1O14646 AC134043.2-201ENST00000624206 2238 ntBASIC25.17■■□□□ 1.62
CHD1O14646 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1O14646 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1O14646 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1O14646 NDUFS6P1-201ENST00000485187 316 ntBASIC25.17■■□□□ 1.62
CHD1O14646 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD1O14646 MIR3677-201ENST00000578964 60 ntBASIC25.17■■□□□ 1.62
CHD1O14646 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CHD1O14646 AC009955.4-201ENST00000597192 544 ntBASIC25.17■■□□□ 1.62
CHD1O14646 AC007718.1-201ENST00000621078 280 ntBASIC25.17■■□□□ 1.62
CHD1O14646 AC148477.9-201ENST00000623974 539 ntBASIC25.17■■□□□ 1.62
CHD1O14646 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
CHD1O14646 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
CHD1O14646 GATB-213ENST00000515812 1893 ntTSL 5 BASIC25.17■■□□□ 1.62
CHD1O14646 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD1O14646 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
CHD1O14646 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 GCK-202ENST00000345378 2421 ntTSL 2 BASIC25.16■■□□□ 1.62
CHD1O14646 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CHD1O14646 RN7SKP214-201ENST00000364208 315 ntBASIC25.16■■□□□ 1.62
CHD1O14646 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC25.16■■□□□ 1.62
CHD1O14646 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC25.16■■□□□ 1.62
CHD1O14646 FOS-204ENST00000554617 796 ntTSL 2 BASIC25.16■■□□□ 1.62
CHD1O14646 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC25.16■■□□□ 1.62
CHD1O14646 MEG3_2.1-201ENST00000611456 105 ntBASIC25.16■■□□□ 1.62
CHD1O14646 AC004923.1-202ENST00000642106 209 ntBASIC25.16■■□□□ 1.62
CHD1O14646 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.16■■□□□ 1.62
CHD1O14646 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC25.16■■□□□ 1.62
CHD1O14646 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD1O14646 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC25.16■■□□□ 1.62
CHD1O14646 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD1O14646 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC25.15■■□□□ 1.62
CHD1O14646 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC25.15■■□□□ 1.62
CHD1O14646 AC079112.1-201ENST00000454972 939 ntBASIC25.15■■□□□ 1.62
CHD1O14646 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CHD1O14646 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms