Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 C18orf15-201ENST00000623680 2534 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 BX005266.1-201ENST00000473402 457 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 NTF6B-201ENST00000591913 560 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC010331.1-201ENST00000611423 582 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC005363.2-201ENST00000618631 242 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 REXO1L3P-201ENST00000622202 1288 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC232323.1-201ENST00000540724 2099 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 REXO1L5P-201ENST00000622260 2098 ntBASIC11.79□□□□□ -0.52
SMKR1H3BMG3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMKR1H3BMG3 AC079776.2-201ENST00000641154 1609 ntBASIC11.78□□□□□ -0.52
SMKR1H3BMG3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 AC112693.3-201ENST00000624819 1983 ntBASIC11.78□□□□□ -0.52
SMKR1H3BMG3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 AC087163.2-201ENST00000457299 853 ntBASIC11.78□□□□□ -0.52
SMKR1H3BMG3 AL671277.2-201ENST00000458060 996 ntBASIC11.78□□□□□ -0.52
SMKR1H3BMG3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 LINC01238-205ENST00000567549 1107 ntBASIC11.78□□□□□ -0.52
SMKR1H3BMG3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 AC006011.2-201ENST00000621313 1158 ntBASIC11.78□□□□□ -0.52
SMKR1H3BMG3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.78□□□□□ -0.52
SMKR1H3BMG3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms