Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 RBM8B-201ENST00000555532 525 ntBASIC19.72■□□□□ 0.75
RGPD3A6NKT7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 CASP16P-204ENST00000635032 809 ntBASIC19.72■□□□□ 0.75
RGPD3A6NKT7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 AL022344.2-201ENST00000568976 968 ntBASIC19.72■□□□□ 0.75
RGPD3A6NKT7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RGPD3A6NKT7 AL390961.4-201ENST00000623958 2535 ntBASIC19.72■□□□□ 0.75
RGPD3A6NKT7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 RN7SKP214-201ENST00000364208 315 ntBASIC19.71■□□□□ 0.75
RGPD3A6NKT7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 MIR4649-201ENST00000582839 64 ntBASIC19.71■□□□□ 0.75
RGPD3A6NKT7 AL136301.1-201ENST00000615830 422 ntBASIC19.71■□□□□ 0.75
RGPD3A6NKT7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 AC134043.2-201ENST00000624206 2238 ntBASIC19.71■□□□□ 0.75
RGPD3A6NKT7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 TBC1D3J-201ENST00000620719 1426 ntBASIC19.71■□□□□ 0.75
RGPD3A6NKT7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RGPD3A6NKT7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 AC090857.1-201ENST00000527400 390 ntBASIC19.7■□□□□ 0.74
RGPD3A6NKT7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD3A6NKT7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms