Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A3BPQ9Y5P4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
COL4A3BPQ9Y5P4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
COL4A3BPQ9Y5P4 CETN4P-206ENST00000642099 2168 ntBASIC17.96■□□□□ 0.46
COL4A3BPQ9Y5P4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
COL4A3BPQ9Y5P4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 CDC14C-201ENST00000428251 1719 ntBASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AL512638.1-201ENST00000457493 794 ntBASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 MIR4745-201ENST00000577608 62 ntBASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AL589739.1-201ENST00000607720 493 ntBASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AL133215.2-201ENST00000609242 977 ntBASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 AL590560.3-201ENST00000623350 461 ntBASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A3BPQ9Y5P4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 AC132872.4-202ENST00000622924 2756 ntBASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 UGT1A2P-201ENST00000454886 866 ntBASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 LINC02447-202ENST00000501888 2146 ntBASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 PAUPAR-201ENST00000630360 2965 ntBASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A3BPQ9Y5P4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 AC069224.1-201ENST00000566372 1715 ntBASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms