Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.07■□□□□ 0.16
PCDHB1Q9Y5F3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 FOXO1B-201ENST00000504678 1527 ntBASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 AC100757.3-201ENST00000622361 1406 ntBASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 AC027369.6-201ENST00000525520 931 ntBASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 AC027307.3-201ENST00000594262 1100 ntBASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB1Q9Y5F3 AC112504.1-201ENST00000623415 1841 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 OR8S1-201ENST00000310194 1080 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 FAM220BP-201ENST00000377689 816 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 PIN1P1-201ENST00000412108 996 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 RN7SL692P-201ENST00000464677 288 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 SPDYE22P-201ENST00000582158 798 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 AC073592.8-201ENST00000624126 511 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 AL358472.5-202ENST00000641448 1267 ntBASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms