Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC106886.4-201ENST00000623557 2502 ntBASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 MYCLP2-201ENST00000449268 967 ntBASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AC023310.3-201ENST00000557027 670 ntBASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AC100756.1-201ENST00000562736 682 ntBASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AC138749.3-201ENST00000567691 622 ntBASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AC116165.1-201ENST00000611806 668 ntBASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTDP1Q9Y5B0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 OR8S1-201ENST00000310194 1080 ntBASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 AC123567.1-201ENST00000548294 1261 ntBASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 AC025048.3-201ENST00000590609 569 ntBASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 AC004790.1-201ENST00000612686 536 ntBASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 AC005702.4-201ENST00000618393 416 ntBASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTDP1Q9Y5B0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 REXO1L8P-201ENST00000604378 1897 ntBASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 AL589987.1-201ENST00000453380 819 ntBASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 INE1-201ENST00000456273 945 ntBASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 AC104596.2-201ENST00000512793 793 ntBASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.5■□□□□ 0.55
CTDP1Q9Y5B0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms