Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 AC005840.4-201ENST00000541242 2494 ntBASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 RNA5SP415-201ENST00000517246 115 ntBASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 AF228730.7-201ENST00000641842 219 ntBASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 EGFEM1P-202ENST00000431685 1563 ntBASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HCC1Q9Y3T6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 GRK6P1-201ENST00000400595 1711 ntBASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AL022342.1-201ENST00000400363 863 ntBASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AC108751.1-201ENST00000490852 363 ntBASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 MIR4751-201ENST00000578027 74 ntBASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AC008667.4-201ENST00000607370 168 ntBASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 AC104109.2-201ENST00000602919 1418 ntBASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.49■□□□□ 0.55
R3HCC1Q9Y3T6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 AC006486.2-201ENST00000624246 2199 ntBASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms