Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 ADH5P3-201ENST00000433842 1137 ntBASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AC093724.1-201ENST00000448659 1027 ntBASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AL135744.1-201ENST00000565098 629 ntBASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AC006486.2-201ENST00000624246 2199 ntBASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAPPC4Q9Y296 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 RPSAP43-201ENST00000402237 625 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 GPX1P2-201ENST00000429271 606 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 SPDYE11-202ENST00000450699 704 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AC112482.1-201ENST00000492080 688 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 SPDYE9P-201ENST00000570642 692 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 SPDYE10P-202ENST00000612005 668 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 SPDYE8P-202ENST00000612377 668 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AC008267.7-201ENST00000624570 1194 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AC007292.2-201ENST00000593524 1812 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 AC073439.1-201ENST00000624121 1774 ntBASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TRAPPC4Q9Y296 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 AC023908.3-201ENST00000564211 3047 ntBASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms