Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 HLA-J-202ENST00000469281 1241 ntBASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AL512361.1-201ENST00000554200 418 ntBASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AL589702.1-201ENST00000641229 1509 ntBASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AL365203.3-201ENST00000609742 2057 ntBASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AL353779.1-201ENST00000434793 351 ntBASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 ZNF890P-202ENST00000530367 1156 ntBASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 CU639417.3-201ENST00000624240 1404 ntBASIC18.15■□□□□ 0.5
HDAC6Q9UBN7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.14■□□□□ 0.5
HDAC6Q9UBN7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
HDAC6Q9UBN7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HDAC6Q9UBN7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HDAC6Q9UBN7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.14■□□□□ 0.5
HDAC6Q9UBN7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HDAC6Q9UBN7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 OR8S1-201ENST00000310194 1080 ntBASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 RN7SL618P-201ENST00000477850 296 ntBASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AP002490.2-201ENST00000524791 560 ntBASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AC010336.2-201ENST00000564226 506 ntBASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AC104794.3-201ENST00000566840 1248 ntBASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AC004790.1-201ENST00000612686 536 ntBASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 AC020765.3-201ENST00000613051 740 ntBASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.14■□□□□ 0.49
HDAC6Q9UBN7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms