Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 AC107373.2-201ENST00000607735 490 ntBASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.02■□□□□ 0.32
CXXC1Q9P0U4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.02■□□□□ 0.31
CXXC1Q9P0U4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.02■□□□□ 0.31
CXXC1Q9P0U4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CXXC1Q9P0U4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.02■□□□□ 0.31
CXXC1Q9P0U4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.02■□□□□ 0.31
CXXC1Q9P0U4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CXXC1Q9P0U4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 AC015818.8-201ENST00000587907 1519 ntBASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 KRT8P19-201ENST00000551916 1455 ntBASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 AC136604.1-201ENST00000418535 575 ntBASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 PHKG1P2-201ENST00000457537 863 ntBASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 EEF1DP1-201ENST00000585891 896 ntBASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 AC093813.1-201ENST00000605066 256 ntBASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXXC1Q9P0U4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 HNRNPUP1-201ENST00000554987 333 ntBASIC17■□□□□ 0.31
CXXC1Q9P0U4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 MIR3619-201ENST00000579667 83 ntBASIC17■□□□□ 0.31
CXXC1Q9P0U4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17■□□□□ 0.31
CXXC1Q9P0U4 AL451050.2-201ENST00000606967 682 ntBASIC17■□□□□ 0.31
CXXC1Q9P0U4 AC138627.1-207ENST00000641560 1006 ntBASIC17■□□□□ 0.31
CXXC1Q9P0U4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXXC1Q9P0U4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms