Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 HAUS4P1-201ENST00000406739 1145 ntBASIC16.3■□□□□ 0.2
HACD3Q9P035 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.3■□□□□ 0.2
HACD3Q9P035 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.3■□□□□ 0.2
HACD3Q9P035 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.3■□□□□ 0.2
HACD3Q9P035 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.3■□□□□ 0.2
HACD3Q9P035 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.3■□□□□ 0.2
HACD3Q9P035 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HACD3Q9P035 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.29■□□□□ 0.2
HACD3Q9P035 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
HACD3Q9P035 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 CNN2P11-201ENST00000429351 262 ntBASIC16.29■□□□□ 0.2
HACD3Q9P035 AC023141.5-201ENST00000458585 616 ntBASIC16.29■□□□□ 0.2
HACD3Q9P035 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.29■□□□□ 0.2
HACD3Q9P035 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 SNHG9-202ENST00000564014 471 ntBASIC16.29■□□□□ 0.2
HACD3Q9P035 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 AC009093.7-201ENST00000623853 1223 ntBASIC16.29■□□□□ 0.2
HACD3Q9P035 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HACD3Q9P035 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.29■□□□□ 0.2
HACD3Q9P035 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HACD3Q9P035 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HACD3Q9P035 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
HACD3Q9P035 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
HACD3Q9P035 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.28■□□□□ 0.2
HACD3Q9P035 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HACD3Q9P035 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.28■□□□□ 0.2
HACD3Q9P035 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms