Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AC010507.1-201ENST00000633895 436 ntBASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AL513477.1-201ENST00000602865 2407 ntBASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AC012569.1-201ENST00000591191 1524 ntBASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 OR2I1P-210ENST00000642037 4691 ntBASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 AC073347.1-201ENST00000421633 2643 ntBASIC13.43□□□□□ -0.26
LIN7CQ9NUP9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AC092919.2-201ENST00000623631 1645 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 MST1L-201ENST00000442552 2185 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 RHOQP3-201ENST00000437982 621 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AL513480.1-201ENST00000451731 511 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AC040169.1-201ENST00000565382 521 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AC023141.13-201ENST00000604991 943 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AC021097.1-201ENST00000607902 574 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 ACTL9-202ENST00000612068 1252 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 AL645728.2-201ENST00000641974 660 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 DBET-201ENST00000630918 3363 ntBASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.42□□□□□ -0.26
LIN7CQ9NUP9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 AP000347.1-202ENST00000435868 847 ntBASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LIN7CQ9NUP9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 PMS2P7-201ENST00000506558 1336 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms