Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 HNRNPUP1-201ENST00000554987 333 ntBASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 AL033527.5-202ENST00000641632 1098 ntBASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 AC055876.3-201ENST00000431496 288 ntBASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 SERBP1P3-201ENST00000459980 809 ntBASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 MIR4313-201ENST00000580760 101 ntBASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 AL390955.2-201ENST00000603032 514 ntBASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 AC097359.3-201ENST00000603982 1210 ntBASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 AC138649.4-201ENST00000612222 287 ntBASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC1Q9NTX5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 PAUPAR-201ENST00000630360 2965 ntBASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 AL590560.3-201ENST00000623350 461 ntBASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 AC100757.3-201ENST00000622361 1406 ntBASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ECHDC1Q9NTX5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
ECHDC1Q9NTX5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms