Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 AC087481.3-201ENST00000602886 1894 ntBASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 LINC00265-3P-201ENST00000447588 903 ntBASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 TPSP2-201ENST00000561760 610 ntBASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 AC106881.1-201ENST00000605849 3329 ntBASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SND1-IT1Q9HBX3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC131009.4-201ENST00000624048 1740 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 IGHV3-47-201ENST00000425060 335 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC074051.2-201ENST00000565115 352 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC091167.2-201ENST00000579581 588 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 LINC01023-201ENST00000606054 436 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AL121956.5-201ENST00000625261 221 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC092919.2-201ENST00000623631 1645 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms