Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.11□□□□□ -0.15
ELL3Q9HB65 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 MRPL20P1-201ENST00000400819 433 ntBASIC14.11□□□□□ -0.15
ELL3Q9HB65 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ELL3Q9HB65 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ELL3Q9HB65 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.1□□□□□ -0.15
ELL3Q9HB65 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.1□□□□□ -0.15
ELL3Q9HB65 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 AC007967.2-201ENST00000432613 625 ntBASIC14.1□□□□□ -0.15
ELL3Q9HB65 RPL13AP23-201ENST00000480739 586 ntBASIC14.1□□□□□ -0.15
ELL3Q9HB65 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 Z83851.2-201ENST00000609564 659 ntBASIC14.1□□□□□ -0.15
ELL3Q9HB65 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ELL3Q9HB65 AC005622.1-201ENST00000636801 1703 ntBASIC14.1□□□□□ -0.15
ELL3Q9HB65 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
ELL3Q9HB65 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ELL3Q9HB65 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ELL3Q9HB65 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.09□□□□□ -0.15
ELL3Q9HB65 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.09□□□□□ -0.15
ELL3Q9HB65 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ELL3Q9HB65 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
ELL3Q9HB65 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms