Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 EEF1DP4-201ENST00000446006 880 ntBASIC15.35■□□□□ 0.05
BRF2Q9HAW0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 CEND1P1-201ENST00000451006 455 ntBASIC15.35■□□□□ 0.05
BRF2Q9HAW0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.35■□□□□ 0.05
BRF2Q9HAW0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 RARRES2P9-201ENST00000565168 469 ntBASIC15.35■□□□□ 0.05
BRF2Q9HAW0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 AC022145.2-201ENST00000598203 171 ntBASIC15.35■□□□□ 0.05
BRF2Q9HAW0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.35■□□□□ 0.05
BRF2Q9HAW0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.35■□□□□ 0.05
BRF2Q9HAW0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 CYP4F24P-201ENST00000586049 1580 ntBASIC15.34■□□□□ 0.05
BRF2Q9HAW0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 AL513210.1-201ENST00000629608 234 ntBASIC15.34■□□□□ 0.05
BRF2Q9HAW0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 TMBIM7P-203ENST00000641617 1718 ntBASIC15.34■□□□□ 0.05
BRF2Q9HAW0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
BRF2Q9HAW0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.33■□□□□ 0.05
BRF2Q9HAW0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.33■□□□□ 0.05
BRF2Q9HAW0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.33■□□□□ 0.05
BRF2Q9HAW0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.33■□□□□ 0.05
BRF2Q9HAW0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BRF2Q9HAW0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms