Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC005237.2-201ENST00000434368 219 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 IGHV3-62-201ENST00000520057 340 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 SLC25A39P2-201ENST00000537614 270 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC079781.4-201ENST00000641908 219 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC022188.1-201ENST00000620960 1664 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 LINC02199-201ENST00000506655 2702 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 AC024909.3-201ENST00000611513 2257 ntBASIC14.38□□□□□ -0.11
NELFAQ9H3P2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.38□□□□□ -0.11
NELFAQ9H3P2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 UXT-AS1-201ENST00000590504 1525 ntBASIC14.37□□□□□ -0.11
NELFAQ9H3P2 AL589702.1-201ENST00000641229 1509 ntBASIC14.37□□□□□ -0.11
NELFAQ9H3P2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 KRT18P32-201ENST00000424695 1287 ntBASIC14.37□□□□□ -0.11
NELFAQ9H3P2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 AL365209.1-201ENST00000624418 6473 ntBASIC14.37□□□□□ -0.11
NELFAQ9H3P2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 NORAD-201ENST00000565493 5339 ntBASIC14.37□□□□□ -0.11
NELFAQ9H3P2 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.37□□□□□ -0.11
NELFAQ9H3P2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFAQ9H3P2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFAQ9H3P2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.36□□□□□ -0.11
NELFAQ9H3P2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms