Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 COL6A4P2-202ENST00000504443 2753 ntBASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 AC068587.6-202ENST00000641839 5619 ntBASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 AC099521.3-201ENST00000624251 2938 ntBASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 TSPY7P-201ENST00000431358 1114 ntBASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.14□□□□□ -0.15
SLIRPQ9GZT3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 AL031432.5-201ENST00000641059 760 ntBASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 AP000867.4-201ENST00000641616 219 ntBASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 WASH6P-202ENST00000359512 1437 ntBASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms