Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 STK25P1-201ENST00000585406 838 ntBASIC13.08□□□□□ -0.32
NKX6-2Q9C056 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 LINC00895-201ENST00000629028 1637 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ECEL1P3-201ENST00000427961 737 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AL390955.1-201ENST00000428694 934 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 RASA4DP-201ENST00000460726 1199 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AC142381.4-202ENST00000563973 229 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ITM2C-210ENST00000620962 501 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AL139011.1-202ENST00000642063 584 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 GGT3P-204ENST00000453783 1664 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 PPT1-213ENST00000641319 2388 ntBASIC13.07□□□□□ -0.32
NKX6-2Q9C056 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NKX6-2Q9C056 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms