Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.27■□□□□ 0.68
RTFDC1Q9BY42 KRT18P43-201ENST00000469825 1281 ntBASIC19.27■□□□□ 0.68
RTFDC1Q9BY42 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.27■□□□□ 0.68
RTFDC1Q9BY42 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.27■□□□□ 0.68
RTFDC1Q9BY42 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.27■□□□□ 0.68
RTFDC1Q9BY42 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.27■□□□□ 0.68
RTFDC1Q9BY42 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTFDC1Q9BY42 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
RTFDC1Q9BY42 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RTFDC1Q9BY42 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RTFDC1Q9BY42 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.27■□□□□ 0.67
RTFDC1Q9BY42 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RTFDC1Q9BY42 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTFDC1Q9BY42 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 AC006001.1-201ENST00000325130 474 ntBASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 AC025279.2-201ENST00000569730 653 ntBASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 AC093813.1-201ENST00000605066 256 ntBASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTFDC1Q9BY42 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AC091271.1-201ENST00000611877 1162 ntBASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTFDC1Q9BY42 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AL607033.1-201ENST00000623900 1599 ntBASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 C2orf27AP3-201ENST00000434123 579 ntBASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AC023310.1-201ENST00000554836 735 ntBASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.24■□□□□ 0.67
RTFDC1Q9BY42 AL354718.3-201ENST00000616414 581 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms