Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AL592424.1-201ENST00000563624 1536 ntBASIC18.64■□□□□ 0.58
SLF1Q9BQI6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SLF1Q9BQI6 AC026691.1-201ENST00000602502 2017 ntBASIC18.64■□□□□ 0.58
SLF1Q9BQI6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 FO393414.2-201ENST00000405153 598 ntBASIC18.64■□□□□ 0.57
SLF1Q9BQI6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 HIST3H2BA-201ENST00000436555 524 ntBASIC18.64■□□□□ 0.57
SLF1Q9BQI6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 CHCHD2P3-201ENST00000603038 451 ntBASIC18.64■□□□□ 0.57
SLF1Q9BQI6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 SLC7A15P-201ENST00000424028 1363 ntBASIC18.64■□□□□ 0.57
SLF1Q9BQI6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLF1Q9BQI6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AC098614.1-201ENST00000368528 745 ntBASIC18.63■□□□□ 0.57
SLF1Q9BQI6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 DGCR5-201ENST00000399539 862 ntBASIC18.63■□□□□ 0.57
SLF1Q9BQI6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AC138969.3-201ENST00000546612 1459 ntBASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AC138932.2-201ENST00000548268 1459 ntBASIC18.63■□□□□ 0.57
SLF1Q9BQI6 AC126755.4-201ENST00000549796 1459 ntBASIC18.63■□□□□ 0.57
SLF1Q9BQI6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 PCDHA1-201ENST00000378133 2726 ntBASIC18.63■□□□□ 0.57
SLF1Q9BQI6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF1Q9BQI6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 AL391005.1-201ENST00000623953 2435 ntBASIC18.62■□□□□ 0.57
SLF1Q9BQI6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 KRT17P7-201ENST00000451704 1104 ntBASIC18.62■□□□□ 0.57
SLF1Q9BQI6 AL589987.1-201ENST00000453380 819 ntBASIC18.62■□□□□ 0.57
SLF1Q9BQI6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.62■□□□□ 0.57
SLF1Q9BQI6 AC055876.2-201ENST00000531834 546 ntBASIC18.62■□□□□ 0.57
SLF1Q9BQI6 TPRX2P-201ENST00000535362 881 ntBASIC18.62■□□□□ 0.57
SLF1Q9BQI6 AC025048.3-201ENST00000590609 569 ntBASIC18.62■□□□□ 0.57
SLF1Q9BQI6 AC008494.3-201ENST00000606615 944 ntBASIC18.62■□□□□ 0.57
SLF1Q9BQI6 AC005702.4-201ENST00000618393 416 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms