Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SMOQ99835 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 SPDYE19P-201ENST00000338590 713 ntBASIC16.75■□□□□ 0.27
SMOQ99835 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 RPL13P2-201ENST00000440687 659 ntBASIC16.75■□□□□ 0.27
SMOQ99835 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 DOC2GP-202ENST00000514950 1163 ntBASIC16.75■□□□□ 0.27
SMOQ99835 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.75■□□□□ 0.27
SMOQ99835 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 AC092337.1-201ENST00000568699 1129 ntBASIC16.75■□□□□ 0.27
SMOQ99835 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SMOQ99835 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.75■□□□□ 0.27
SMOQ99835 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 AF228730.6-201ENST00000641497 218 ntBASIC16.75■□□□□ 0.27
SMOQ99835 AC084121.3-201ENST00000641716 218 ntBASIC16.75■□□□□ 0.27
SMOQ99835 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SMOQ99835 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SMOQ99835 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SMOQ99835 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 AL607033.1-201ENST00000623900 1599 ntBASIC16.75■□□□□ 0.27
SMOQ99835 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 PCDHA1-201ENST00000378133 2726 ntBASIC16.75■□□□□ 0.27
SMOQ99835 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.74■□□□□ 0.27
SMOQ99835 AL035633.1-201ENST00000406139 838 ntBASIC16.74■□□□□ 0.27
SMOQ99835 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.74■□□□□ 0.27
SMOQ99835 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 MIR4313-201ENST00000580760 101 ntBASIC16.74■□□□□ 0.27
SMOQ99835 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 AC004233.3-201ENST00000607794 1269 ntBASIC16.74■□□□□ 0.27
SMOQ99835 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.74■□□□□ 0.27
SMOQ99835 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
SMOQ99835 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMOQ99835 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMOQ99835 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SMOQ99835 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.73■□□□□ 0.27
SMOQ99835 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 KRT18P64-201ENST00000434946 1219 ntBASIC16.73■□□□□ 0.27
SMOQ99835 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms