Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 AC009078.2-202ENST00000463353 338 ntBASIC16.07■□□□□ 0.16
CPNE1Q99829 AC112191.1-201ENST00000523689 701 ntBASIC16.07■□□□□ 0.16
CPNE1Q99829 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CPNE1Q99829 AC243562.2-201ENST00000561247 970 ntBASIC16.07■□□□□ 0.16
CPNE1Q99829 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE1Q99829 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE1Q99829 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE1Q99829 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 AC090616.6-203ENST00000579186 1945 ntBASIC16.07■□□□□ 0.16
CPNE1Q99829 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.07■□□□□ 0.16
CPNE1Q99829 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CPNE1Q99829 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.06■□□□□ 0.16
CPNE1Q99829 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE1Q99829 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CPNE1Q99829 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.06■□□□□ 0.16
CPNE1Q99829 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 AC007967.2-201ENST00000432613 625 ntBASIC16.06■□□□□ 0.16
CPNE1Q99829 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE1Q99829 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 AC105233.2-201ENST00000523697 349 ntBASIC16.06■□□□□ 0.16
CPNE1Q99829 AF228730.5-201ENST00000530288 346 ntBASIC16.06■□□□□ 0.16
CPNE1Q99829 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE1Q99829 RARRES2P8-201ENST00000566335 367 ntBASIC16.06■□□□□ 0.16
CPNE1Q99829 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.06■□□□□ 0.16
CPNE1Q99829 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 AC061975.2-201ENST00000581722 295 ntBASIC16.06■□□□□ 0.16
CPNE1Q99829 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE1Q99829 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 SPTSSB-204ENST00000617024 1292 ntBASIC16.06■□□□□ 0.16
CPNE1Q99829 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE1Q99829 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE1Q99829 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE1Q99829 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CPNE1Q99829 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 AC023824.1-201ENST00000562945 2975 ntBASIC16.05■□□□□ 0.16
CPNE1Q99829 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CPNE1Q99829 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
CPNE1Q99829 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE1Q99829 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms